miRBase entry: ppc-mir-8229b

Stem-loop ppc-mir-8229b


Accession
MI0027001
Description
Pristionchus pacificus ppc-mir-8229b precursor miRNA


Sequence

CAUAGUCUUCAUGAGGUUGAACGuuauauugaaagcgUUGACUUCGUGAGAGGCUAAGGG
..((((((((((((((((.((((((........)))))))))))))))).))))))....

Structure
--CA      -          G      aua 
    UAGUCU UCAUGAGGUU AACGuu   u
    |||||| |||||||||| ||||||    
    AUCGGA AGUGCUUCAG UUgcga   u
GGGA      G          -      aag 


Annotation confidence Not enough data
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Genome context
ABKE03000053.1: 1505461-1505520 [-]

Database links

Mature ppc-miR-8229b-5p

Accession MIMAT0033142
Description Pristionchus pacificus ppc-miR-8229b-5p mature miRNA
Sequence 1 - CAUAGUCUUCAUGAGGUUGAACG - 23
Evidence experimental
Illumina [1]

Mature ppc-miR-8229b-3p

Accession MIMAT0033143
Description Pristionchus pacificus ppc-miR-8229b-3p mature miRNA
Sequence 38 - UUGACUUCGUGAGAGGCUAAGGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260