Stem-loop ppc-mir-8308

Accession

MI0027003

Description

Pristionchus pacificus ppc-mir-8308 precursor miRNA

Sequence

CCAUUGAUCUCUCCACUUUUCAuaucauuuaaugUAAAGUGAGCGCUCAAUGAGU
.((((((.(.(((.(((((.(((........))).)))))))).).))))))...

Structure

--C      U U   C     U   auc 
   CAUUGA C CUC ACUUU CAu   a
   |||||| | ||| ||||| |||    
   GUAACU G GAG UGAAA gua   u
UGA      C C   -     U   auu 

Annotation confidence Not enough data

Genome context

ABKE03000003.1: 125279-125333 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppc-mir-8308

Mature ppc-miR-8308-5p

• Accession: MIMAT0033146
• Description: Pristionchus pacificus ppc-miR-8308-5p mature miRNA
• Sequence: 1 - CCAUUGAUCUCUCCACUUUUCA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8308-3p

• Accession: MIMAT0033147
• Description: Pristionchus pacificus ppc-miR-8308-3p mature miRNA
• Sequence: 35 - UAAAGUGAGCGCUCAAUGAGU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260