Stem-loop ppc-mir-8310

Accession

MI0027005

Description

Pristionchus pacificus ppc-mir-8310 precursor miRNA

Sequence

GAGCGGGUGUAGAUAGACAUGCCAaucucaUAUCUUCUGUCGUCCGGUCCAGC
((.((((((((((.(((.(((.......))).))))))).)))))).))....

Structure

----  G      -    U   C   CC 
    GA CGGGUG UAGA AGA AUG  A
    || |||||| |||| ||| |||  a
    CU GCCUGC GUCU UCU Uac  u
CGAC  G      U    -   A   uc 

Annotation confidence Not enough data

Genome context

ABKE03000076.1: 529827-529879 [+]

Mature ppc-miR-8310-5p

• Accession: MIMAT0033150
• Description: Pristionchus pacificus ppc-miR-8310-5p mature miRNA
• Sequence: 1 - GAGCGGGUGUAGAUAGACAUGCCA - 24
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8310-3p

• Accession: MIMAT0033151
• Description: Pristionchus pacificus ppc-miR-8310-3p mature miRNA
• Sequence: 31 - UAUCUUCUGUCGUCCGGUCCAGC - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260