Stem-loop ppc-mir-8319

Accession

MI0027020

Description

Pristionchus pacificus ppc-mir-8319 precursor miRNA

Sequence

CGAGGCUCAUUGCGAAUUuccaccuuguacgguagAAAUUAGCAAGUGAGGCUCCAAC
.(((.((((((((.((((((.(((......))).)))))).)).)))))).)))....

Structure

---C   G      -  G      c   uu 
    GAG CUCAUU GC AAUUuc acc  g
    ||| |||||| || |||||| |||   
    CUC GAGUGA CG UUAAAg ugg  u
CAAC   G      A  A      a   ca 

Annotation confidence Not enough data

Genome context

ABKE03000060.1: 7837876-7837933 [-]

Mature ppc-miR-8319-5p

• Accession: MIMAT0033178
• Description: Pristionchus pacificus ppc-miR-8319-5p mature miRNA
• Sequence: 1 - CGAGGCUCAUUGCGAAUU - 18
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8319-3p

• Accession: MIMAT0033179
• Description: Pristionchus pacificus ppc-miR-8319-3p mature miRNA
• Sequence: 36 - AAAUUAGCAAGUGAGGCUCCAAC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260