Stem-loop ppc-mir-8321

Accession

MI0027022

Description

Pristionchus pacificus ppc-mir-8321 precursor miRNA

Sequence

UCGGCAAUUCAGACUGACAUGAcugauauucugguucAUGUUCAUCUGAAUUGUUGGCA
.((((((((((((..(((((((((........)).)))))))..))))))))))))...

Structure

--U            CU       -  gau 
   CGGCAAUUCAGA  GACAUGA cu   a
   ||||||||||||  ||||||| ||    
   GUUGUUAAGUCU  UUGUAcu gg   u
ACG            AC       u  ucu 

Annotation confidence Low

Genome context

ABKE03000119.1: 876927-876985 [+]

Mature ppc-miR-8321-5p

• Accession: MIMAT0033182
• Description: Pristionchus pacificus ppc-miR-8321-5p mature miRNA
• Sequence: 1 - UCGGCAAUUCAGACUGACAUGA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8321-3p

• Accession: MIMAT0033183
• Description: Pristionchus pacificus ppc-miR-8321-3p mature miRNA
• Sequence: 38 - AUGUUCAUCUGAAUUGUUGGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260