Stem-loop ppc-mir-8322

Accession

MI0027023

Description

Pristionchus pacificus ppc-mir-8322 precursor miRNA

Sequence

CCGACCACUUUUAUCUUUCAUCCauccuucaguuaugaggCUGAAAGAUAAAUUGGCCGAUA
.((.(((..(((((((((((.((.....(((....))))).))))))))))).))).))...

Structure

--C  A   CU           U  auccu   g 
   CG CCA  UUUAUCUUUCA CC     uca u
   || |||  ||||||||||| ||     |||  
   GC GGU  AAAUAGAAAGU gg     agu u
AUA  C   -U           C  -----   a 

Annotation confidence Low

Genome context

ABKE03000052.1: 388703-388764 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppc-mir-8322

Mature ppc-miR-8322-5p

• Accession: MIMAT0033184
• Description: Pristionchus pacificus ppc-miR-8322-5p mature miRNA
• Sequence: 1 - CCGACCACUUUUAUCUUUCAUCC - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8322-3p

• Accession: MIMAT0033185
• Description: Pristionchus pacificus ppc-miR-8322-3p mature miRNA
• Sequence: 41 - CUGAAAGAUAAAUUGGCCGAUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260