Stem-loop ppc-mir-8323

Accession

MI0027026

Description

Pristionchus pacificus ppc-mir-8323 precursor miRNA

Sequence

UGGUAGAAUUCAGAUGAGAUCAagaugcacugcauauacaugUUCACAUUCUCGAAGUCUACUGCG
.((((((.((((((((.((.((..((((...)))).....)).)).)).))).))).))))))...

Structure

--U      A   -   -  A  U  ---ag    a 
   GGUAGA UUC AGA UG GA CA     augc  
   |||||| ||| ||| || || ||     |||| c
   UCAUCU AAG UCU AC CU gu     uacg  
GCG      G   C   U  A  U  acaua    u 

Annotation confidence Not enough data

Genome context

ABKE03000038.1: 268641-268706 [+]

Mature ppc-miR-8323-5p

• Accession: MIMAT0033190
• Description: Pristionchus pacificus ppc-miR-8323-5p mature miRNA
• Sequence: 1 - UGGUAGAAUUCAGAUGAGAUCA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8323-3p

• Accession: MIMAT0033191
• Description: Pristionchus pacificus ppc-miR-8323-3p mature miRNA
• Sequence: 43 - UUCACAUUCUCGAAGUCUACUGCG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260