Stem-loop ppc-mir-8325

Accession

MI0027028

Description

Pristionchus pacificus ppc-mir-8325 precursor miRNA

Sequence

CGCGUACUCCUCGUUGCCAUUCGcgaauauugaaugcgAAUGGCAUCAGGAGGUCGGCGAG
((((..(((((.(.((((((((((...........)))))))))).))))))..).)))..

Structure

--   - UA     C U          gaau 
  CGC G  CUCCU G UGCCAUUCGc    a
  ||| |  ||||| | ||||||||||    u
  GCG C  GAGGA C ACGGUAAgcg    u
GA   G UG     - U          uaag 

Annotation confidence Low

Genome context

ABKE03000093.1: 5576578-5576638 [+]

Mature ppc-miR-8325-5p

• Accession: MIMAT0033194
• Description: Pristionchus pacificus ppc-miR-8325-5p mature miRNA
• Sequence: 1 - CGCGUACUCCUCGUUGCCAUUCG - 23
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-8325-3p

• Accession: MIMAT0033195
• Description: Pristionchus pacificus ppc-miR-8325-3p mature miRNA
• Sequence: 39 - AAUGGCAUCAGGAGGUCGGCGAG - 61
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260