Stem-loop ppc-mir-8330

Accession

MI0027033

Description

Pristionchus pacificus ppc-mir-8330 precursor miRNA

Sequence

GUACGGUAGAACGGGGAACACGAuggaaucaaucGAUAAUCCCCGUAUACUGUAGG
.(((((((..(((((((...((((.......))))....))))))).)))))))..

Structure

-G       GA       -ACA    gg 
  UACGGUA  ACGGGGA    CGAu  a
  |||||||  |||||||    ||||  a
  AUGUCAU  UGCCCCU    Gcua  u
GG       -A       AAUA    ac 

Annotation confidence Not enough data

Genome context

ABKE03000122.1: 2675562-2675617 [-]

Mature ppc-miR-8330-5p

• Accession: MIMAT0033204
• Description: Pristionchus pacificus ppc-miR-8330-5p mature miRNA
• Sequence: 1 - GUACGGUAGAACGGGGAACACGA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8330-3p

• Accession: MIMAT0033205
• Description: Pristionchus pacificus ppc-miR-8330-3p mature miRNA
• Sequence: 35 - GAUAAUCCCCGUAUACUGUAGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260