Stem-loop ppc-mir-8336

Accession

MI0027040

Description

Pristionchus pacificus ppc-mir-8336 precursor miRNA

Sequence

UACUUGAACUGCAUAUUUCGGAcuguuuccacacgcuguUGGAGAUUGCAUUUUGAGUAGA
((((((((.((((.(((((.(((.((........)).))).))))))))).))))))))..

Structure

--        C    U     G   u  uuc 
  UACUUGAA UGCA AUUUC GAc gu   c
  |||||||| |||| ||||| ||| ||    
  AUGAGUUU ACGU UAGAG Uug cg   a
AG        U    -     G   u  cac 

Annotation confidence Low

Genome context

ABKE03000096.1: 185624-185684 [-]

Mature ppc-miR-8336-5p

• Accession: MIMAT0033218
• Description: Pristionchus pacificus ppc-miR-8336-5p mature miRNA
• Sequence: 1 - UACUUGAACUGCAUAUUUCGGA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8336-3p

• Accession: MIMAT0033219
• Description: Pristionchus pacificus ppc-miR-8336-3p mature miRNA
• Sequence: 40 - UGGAGAUUGCAUUUUGAGUAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260