Stem-loop ppc-mir-8337

Accession

MI0027041

Description

Pristionchus pacificus ppc-mir-8337 precursor miRNA

Sequence

GUGAGUACCAUGCAUUCAAUCCugguucuucaugGUUCGAUGCCUGGUACUUACAGA
((((((((((.(((((.((((.(((....))).)))).))))).))))))))))...

Structure

---          U     C    C   u 
   GUGAGUACCA GCAUU AAUC ugg u
   |||||||||| ||||| |||| |||  
   CAUUCAUGGU CGUAG UUGg acu c
AGA          C     C    u   u 

Annotation confidence Low

Genome context

ABKE03000062.1: 3345708-3345764 [+]

Mature ppc-miR-8337-5p

• Accession: MIMAT0033220
• Description: Pristionchus pacificus ppc-miR-8337-5p mature miRNA
• Sequence: 1 - GUGAGUACCAUGCAUUCAAUCC - 22
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-8337-3p

• Accession: MIMAT0033221
• Description: Pristionchus pacificus ppc-miR-8337-3p mature miRNA
• Sequence: 35 - GUUCGAUGCCUGGUACUUACAGA - 57
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260