Stem-loop ppc-mir-8341

Accession

MI0027045

Description

Pristionchus pacificus ppc-mir-8341 precursor miRNA

Sequence

GUAGAGCAUCUCGGCCGACCGCggaaacgcGGCCUCCAGCUUGUUGUACG
(((.((((.((.((..(.(((((....))))))..))))..)))).))).

Structure

-   G    -U  C  CC A     g 
 GUA AGCA  CU GG  G CCGCg a
 ||| ||||  || ||  | |||||  
 CAU UUGU  GA CC  C GGcgc a
G   G    UC  -  UC -     a 

Annotation confidence Not enough data

Genome context

ABKE03000059.1: 689245-689294 [-]

Mature ppc-miR-8341-5p

• Accession: MIMAT0033227
• Description: Pristionchus pacificus ppc-miR-8341-5p mature miRNA
• Sequence: 1 - GUAGAGCAUCUCGGCCGACCGC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8341-3p

• Accession: MIMAT0033228
• Description: Pristionchus pacificus ppc-miR-8341-3p mature miRNA
• Sequence: 31 - GGCCUCCAGCUUGUUGUACG - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260