Stem-loop ppc-mir-8343

Accession

MI0027047

Description

Pristionchus pacificus ppc-mir-8343 precursor miRNA

Sequence

UGGCAAGAACUUCGGCACGGUCUggaucauaggaucuaugagaaucccuuuuccucAUGGGCCGCUCUUGCCCGC
.(((((((....((((.(.((..(((.....((((((...)).))))....)))..)).))))).)))))))...

Structure

--U       ACUU    A G  CU   ucaua    -  a 
   GGCAAGA    CGGC C GU  gga     ggau cu  
   |||||||    |||| | ||  |||     |||| || u
   CCGUUCU    GCCG G UA  ccu     ccua ga  
CGC       ---C    - G  cu   -uuuc    a  g 

Annotation confidence Low

Genome context

Unknown

Mature ppc-miR-8343-5p

• Accession: MIMAT0033231
• Description: Pristionchus pacificus ppc-miR-8343-5p mature miRNA
• Sequence: 1 - UGGCAAGAACUUCGGCACGGUCU - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8343-3p

• Accession: MIMAT0033232
• Description: Pristionchus pacificus ppc-miR-8343-3p mature miRNA
• Sequence: 57 - AUGGGCCGCUCUUGCCCGC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260