Stem-loop ppc-mir-8345

Accession

MI0027050

Description

Pristionchus pacificus ppc-mir-8345 precursor miRNA

Sequence

UCUUCAGUGAUCAUUCAAAUCCaucuucaaauaguggUUUUGUAUGACCUCACUGUCGAUA
((..((((((((((.((((.(((.((......))))).)))).))))..))))))..))..

Structure

--  UU      --    U    U   u  uc 
  UC  CAGUGA  UCAU CAAA CCa cu  a
  ||  ||||||  |||| |||| ||| ||   
  AG  GUCACU  AGUA GUUU ggu ga  a
AU  CU      CC    U    U   -  ua 

Annotation confidence Low

Genome context

ABKE03000021.1: 1850281-1850341 [+]

Mature ppc-miR-8345-5p

• Accession: MIMAT0033236
• Description: Pristionchus pacificus ppc-miR-8345-5p mature miRNA
• Sequence: 1 - UCUUCAGUGAUCAUUCAAAUCC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8345-3p

• Accession: MIMAT0033237
• Description: Pristionchus pacificus ppc-miR-8345-3p mature miRNA
• Sequence: 38 - UUUUGUAUGACCUCACUGUCGAUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260