Stem-loop ppc-mir-8346

Accession

MI0027051

Description

Pristionchus pacificus ppc-mir-8346 precursor miRNA

Sequence

CUUGAUAUCUUACACAGACUACAucuugaugaauguuugUAGCUGUAUCAGAUAUCAAGGA
((((((((((...((((.(((((..............)))))))))...))))))))))..

Structure

--          UAC    A     ucuuga 
  CUUGAUAUCU   ACAG CUACA      u
  ||||||||||   |||| |||||       
  GAACUAUAGA   UGUC GAUgu      g
AG          CUA    -     uuguaa 

Annotation confidence Low

Genome context

ABKE03000062.1: 2154682-2154742 [+]

Mature ppc-miR-8346-5p

• Accession: MIMAT0033238
• Description: Pristionchus pacificus ppc-miR-8346-5p mature miRNA
• Sequence: 1 - CUUGAUAUCUUACACAGACUACA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8346-3p

• Accession: MIMAT0033239
• Description: Pristionchus pacificus ppc-miR-8346-3p mature miRNA
• Sequence: 40 - UAGCUGUAUCAGAUAUCAAGGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260