Stem-loop ppc-mir-8347

Accession

MI0027053

Description

Pristionchus pacificus ppc-mir-8347 precursor miRNA

Sequence

UGGCUAUUCCGCGCGAUUCAAACUauuucaugauagUCGAAUCGUACCAAGUAGCCGGC
((((((((..(.(((((((..((((((....)))))).))))))).)..))))))))..

Structure

--        CC C       AA      u 
  UGGCUAUU  G GCGAUUC  ACUauu c
  ||||||||  | |||||||  ||||||  
  GCCGAUGA  C UGCUAAG  Ugauag a
CG        AC A       -C      u 

Annotation confidence Low

Genome context

ABKE03000076.1: 2662310-2662368 [-]

Mature ppc-miR-8347-5p

• Accession: MIMAT0033242
• Description: Pristionchus pacificus ppc-miR-8347-5p mature miRNA
• Sequence: 1 - UGGCUAUUCCGCGCGAUUCAAACU - 24
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-8347-3p

• Accession: MIMAT0033243
• Description: Pristionchus pacificus ppc-miR-8347-3p mature miRNA
• Sequence: 37 - UCGAAUCGUACCAAGUAGCCGGC - 59
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260