Stem-loop ppc-mir-8355

Accession

MI0027068

Description

Pristionchus pacificus ppc-mir-8355 precursor miRNA

Sequence

ACUUGCGCCGUUGAACGCUGCUcacuggucuugauUAGCGUAAACGGGUCAAGUGC
(((((..(((((..((((((.(((.......))).)))))).)))))..)))))..

Structure

--     CG     GA      C   cu 
  ACUUG  CCGUU  ACGCUG Uca  g
  |||||  |||||  |||||| |||  g
  UGAAC  GGCAA  UGCGAU agu  u
CG     UG     -A      u   uc 

Annotation confidence Not enough data

Genome context

ABKE03000028.1: 1908093-1908148 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ppc-mir-8355

Mature ppc-miR-8355-5p

• Accession: MIMAT0033272
• Description: Pristionchus pacificus ppc-miR-8355-5p mature miRNA
• Sequence: 1 - ACUUGCGCCGUUGAACGCUGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8355-3p

• Accession: MIMAT0033273
• Description: Pristionchus pacificus ppc-miR-8355-3p mature miRNA
• Sequence: 36 - UAGCGUAAACGGGUCAAGUGC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260