Stem-loop ppc-mir-8358

Accession

MI0027071

Description

Pristionchus pacificus ppc-mir-8358 precursor miRNA

Sequence

UCUUUCAGAUUUUUCACCCGACAuggcauuuuugaauuuacaugUUUGGCCGAAUUUCUGGAAGUCA
.((((((((..(((..((.((((((...............)))))).))..)))..))))))))...

Structure

--U        UU   CA  C      gcauuu 
   CUUUCAGA  UUU  CC GACAug      u
   ||||||||  |||  || ||||||      u
   GAAGGUCU  AAG  GG UUguac      g
ACU        UU   CC  U      auuuaa 

Annotation confidence Not enough data

Genome context

ABKE03000073.1: 227347-227413 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from ppc-mir-8358

Mature ppc-miR-8358-5p

• Accession: MIMAT0033278
• Description: Pristionchus pacificus ppc-miR-8358-5p mature miRNA
• Sequence: 1 - UCUUUCAGAUUUUUCACCCGACA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8358-3p

• Accession: MIMAT0033279
• Description: Pristionchus pacificus ppc-miR-8358-3p mature miRNA
• Sequence: 45 - UUUGGCCGAAUUUCUGGAAGUCA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260