Stem-loop ppc-mir-8360

Accession

MI0027073

Description

Pristionchus pacificus ppc-mir-8360 precursor miRNA

Sequence

CCGGCGAGAGACCAUGAGACAGUgagcucucucaauUGUCCAUGCUCUCUCGUCGAUC
.((((((((((.((((.(((((((((....))).)))))))))).))))))))))...

Structure

--C          C    A      -   c 
   CGGCGAGAGA CAUG GACAGU gag u
   |||||||||| |||| |||||| |||  
   GCUGCUCUCU GUAC CUGUua cuc c
CUA          C    -      a   u 

Annotation confidence Low

Genome context

ABKE03000021.1: 3048810-3048867 [+]

Mature ppc-miR-8360-5p

• Accession: MIMAT0033282
• Description: Pristionchus pacificus ppc-miR-8360-5p mature miRNA
• Sequence: 1 - CCGGCGAGAGACCAUGAGACAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8360-3p

• Accession: MIMAT0033283
• Description: Pristionchus pacificus ppc-miR-8360-3p mature miRNA
• Sequence: 37 - UGUCCAUGCUCUCUCGUCGAUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260