Stem-loop ppc-mir-8362

Accession

MI0027077

Description

Pristionchus pacificus ppc-mir-8362 precursor miRNA

Sequence

UCGCUGAUGUUGGACAAAAGUgauuauuuagaucgCGAUGACAGCUUUAAAGAUA
((..(((.((((..((...((((((.....))))))..)).)))).)))..))..

Structure

--  GC   U    GA  AAA      a 
  UC  UGA GUUG  CA   GUgauu u
  ||  ||| ||||  ||   |||||| u
  AG  AUU CGAC  GU   Cgcuag u
AU  AA   U    -A  -AG      a 

Annotation confidence Low

Genome context

ABKE03000041.1: 1754384-1754438 [+]

Mature ppc-miR-8362-5p

• Accession: MIMAT0033290
• Description: Pristionchus pacificus ppc-miR-8362-5p mature miRNA
• Sequence: 1 - UCGCUGAUGUUGGACAAAAGU - 21
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8362-3p

• Accession: MIMAT0033291
• Description: Pristionchus pacificus ppc-miR-8362-3p mature miRNA
• Sequence: 36 - CGAUGACAGCUUUAAAGAUA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260