Stem-loop ppc-mir-8252b

Accession

MI0027079

Description

Pristionchus pacificus ppc-mir-8252b precursor miRNA

Sequence

UUUGGCUACCGUGGAUAUGUGUUuacuauuuggcguuaUACACAGUCCCCUGUAGUUGAGA
(((((((((.(.((((.(((((..((........))...))))))))).).))))))))).

Structure

-         C U    A     -Uu  uau 
 UUUGGCUAC G GGAU UGUGU   ac   u
 ||||||||| | |||| |||||   ||    
 GAGUUGAUG C CCUG ACACA   ug   u
A         U C    -     Uau  cgg 

Annotation confidence Low

Genome context

ABKE03000093.1: 2975053-2975113 [+]

Mature ppc-miR-8252b-5p

• Accession: MIMAT0033294
• Description: Pristionchus pacificus ppc-miR-8252b-5p mature miRNA
• Sequence: 1 - UUUGGCUACCGUGGAUAUGUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8252b-3p

• Accession: MIMAT0033295
• Description: Pristionchus pacificus ppc-miR-8252b-3p mature miRNA
• Sequence: 39 - UACACAGUCCCCUGUAGUUGAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260