Stem-loop str-mir-50

Accession

MI0027082

Description

Strongyloides ratti str-mir-50 precursor miRNA

Sequence

UGAUAUGUCUGGUAUUCUUGGGUugaucugguccagcCGAGUAAUAUUAGACAUAUCGAG
(((((((((((((((((((((.(.(((...))).).))))).))))))))))))))))..

Structure

--                -     G u   c 
  UGAUAUGUCUGGUAUU CUUGG U gau  
  |||||||||||||||| ||||| | ||| u
  GCUAUACAGAUUAUAA GAGCc a cug  
GA                U     g c   g 

Annotation confidence Low

Genome context

Sratti_scf00001_Chr02: 1640684-1640743 [+]

Mature str-miR-50-5p

• Accession: MIMAT0033300
• Description: Strongyloides ratti str-miR-50-5p mature miRNA
• Sequence: 1 - UGAUAUGUCUGGUAUUCUUGGGU - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-50-3p

• Accession: MIMAT0033301
• Description: Strongyloides ratti str-miR-50-3p mature miRNA
• Sequence: 38 - CGAGUAAUAUUAGACAUAUCGAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260