Stem-loop str-lin-4

Accession

MI0027102

Description

Strongyloides ratti str-lin-4 precursor miRNA

Sequence

UCCCUGAGACUCUACUUGUGAcagauuuaauaugucCCAAGUUAGAUGAUCAGGUACC
..(((((...((((((((.((((.........)))).)))).))))...)))))....

Structure

--UC     GAC    -    U    gau 
    CCUGA   UCUA CUUG GAca   u
    |||||   |||| |||| ||||   u
    GGACU   AGAU GAAC cugu   a
CCAU     AGU    U    C    aua 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_ChrX: 2025474-2025531 [+]

Mature str-lin-4-5p

• Accession: MIMAT0033336
• Description: Strongyloides ratti str-lin-4-5p mature miRNA
• Sequence: 1 - UCCCUGAGACUCUACUUGUGA - 21
• Evidence: experimental ; Illumina [1]

Mature str-lin-4-3p

• Accession: MIMAT0033337
• Description: Strongyloides ratti str-lin-4-3p mature miRNA
• Sequence: 37 - CCAAGUUAGAUGAUCAGGUACC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260