Stem-loop str-mir-236

Accession

MI0027104

Description

Strongyloides ratti str-mir-236 precursor miRNA

Sequence

CGUCAUUAUCGCAGCUAUUAGAgacauuuugauugcuuUAAUACUGUCAGGUAAUGACGCU
((((((((((((((.((((((((.((.......))))))))))))))..))))))))))..

Structure

--          --    C        a  uu 
  CGUCAUUAUC  GCAG UAUUAGAg ca  u
  ||||||||||  |||| |||||||| ||  u
  GCAGUAAUGG  UGUC AUAAUuuc gu  g
UC          AC    -        -  ua 

Annotation confidence Low

Genome context

Sratti_scf00015_Chr00: 291107-291167 [+]

Mature str-miR-236-5p

• Accession: MIMAT0033340
• Description: Strongyloides ratti str-miR-236-5p mature miRNA
• Sequence: 1 - CGUCAUUAUCGCAGCUAUUAGA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-236-3p

• Accession: MIMAT0033341
• Description: Strongyloides ratti str-miR-236-3p mature miRNA
• Sequence: 39 - UAAUACUGUCAGGUAAUGACGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260