Stem-loop str-mir-86

Accession

MI0027111

Description

Strongyloides ratti str-mir-86 precursor miRNA

Sequence

12694 reads, 236.0 reads per million, 12 experiments

UAAGUGAAUGCUUUGCCACAGUCuugaauuuagaauccuagCCUGCUGCAACAUUCACUUGGC
((((((((((..((((..(((.((.((........))..)).)))..))))))))))))))..

Structure

--          CU    CA   U  -u  auu 
  UAAGUGAAUG  UUGC  CAG Cu  ga   u
  ||||||||||  ||||  ||| ||  ||    
  GUUCACUUAC  AACG  GUC ga  cu   a
CG          --    UC   C  uc  aag 

Annotation confidence High

Genome context

Sratti_scf00002_Chr02: 1950518-1950580 [-]

Mature str-miR-86-5p

• Accession: MIMAT0033354
• Description: Strongyloides ratti str-miR-86-5p mature miRNA
• Sequence: 1 - UAAGUGAAUGCUUUGCCACAGUC - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-86-3p

• Accession: MIMAT0033355
• Description: Strongyloides ratti str-miR-86-3p mature miRNA
• Sequence: 42 - CCUGCUGCAACAUUCACUUGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260