Stem-loop str-mir-8375

Accession

MI0027130

Description

Strongyloides ratti str-mir-8375 precursor miRNA

Sequence

UUUUAAGCAUCGGUAACAAACAuauuuuuuaaaaaugUUUGGGACCUGUGUUUAAGUAA
.(((((((((.(((..(((((((.(((...))).)))))))..))).)))))))))...

Structure

--U         C   AA       a   u 
   UUUAAGCAU GGU  CAAACAu uuu  
   ||||||||| |||  ||||||| ||| u
   GAAUUUGUG CCA  GUUUgua aaa  
AAU         U   GG       a   u 

Annotation confidence Low

Genome context

Sratti_scf00001_Chr02: 4551121-4551179 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8375

Mature str-miR-8375-5p

• Accession: MIMAT0033392
• Description: Strongyloides ratti str-miR-8375-5p mature miRNA
• Sequence: 1 - UUUUAAGCAUCGGUAACAAACA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8375-3p

• Accession: MIMAT0033393
• Description: Strongyloides ratti str-miR-8375-3p mature miRNA
• Sequence: 38 - UUUGGGACCUGUGUUUAAGUAA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260