miRBase entry: str-mir-8376

Stem-loop str-mir-8376

Accession

MI0027131

Description

Strongyloides ratti str-mir-8376 precursor miRNA

Sequence

UACUCAGUACGUAACAAAGAUUaauuaaauacaaauaucUUUGCAACGUAUCUGGGUUUAC
.(((((((((((..(((((((...............)))))))..))))).))))))....

Structure

---U      -     AA       Uaauua 
    ACUCAG UACGU  CAAAGAU      a
    |||||| |||||  |||||||      a
    UGGGUC AUGCA  GUUUcua      u
CAUU      U     AC       uaaaca

Annotation confidence Not enough data

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Genome context

Sratti_scf00001_ChrX: 2080639-2080699 [-]

Clustered miRNAs

10 other miRNAs are < 10 kb from str-mir-8376

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature str-miR-8376-5p

Accession	MIMAT0033394
Description	Strongyloides ratti str-miR-8376-5p mature miRNA
Sequence	1 - UACUCAGUACGUAACAAAGAUU - 22
Evidence	experimental Illumina [1]

Mature str-miR-8376-3p

Accession	MIMAT0033395
Description	Strongyloides ratti str-miR-8376-3p mature miRNA
Sequence	40 - UUUGCAACGUAUCUGGGUUUAC - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 23729632
Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
"Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
"Genome Biol Evol (2013) 5:1246-1260