Stem-loop str-mir-8379a

Accession

MI0027140

Description

Strongyloides ratti str-mir-8379a precursor miRNA

Sequence

AGCUGUCUUUUACAGUAUCAGAuauauuaaaaauuuucUAAUACUGCCUUAGACGGCUAA
((((((((....((((((.(((..............))).))))))....))))))))..

Structure

--        UUUA      C   uauauu 
  AGCUGUCU    CAGUAU AGA      a
  ||||||||    |||||| |||       
  UCGGCAGA    GUCAUA Ucu      a
AA        UUCC      A   uuuaaa 

Annotation confidence Low

Genome context

Sratti_scf00002_Chr02: 6867792-6867851 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8379a

Mature str-miR-8379a-5p

• Accession: MIMAT0033412
• Description: Strongyloides ratti str-miR-8379a-5p mature miRNA
• Sequence: 1 - AGCUGUCUUUUACAGUAUCAGA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8379a-3p

• Accession: MIMAT0033413
• Description: Strongyloides ratti str-miR-8379a-3p mature miRNA
• Sequence: 39 - UAAUACUGCCUUAGACGGCUAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260