Stem-loop str-mir-8382

Accession

MI0027144

Description

Strongyloides ratti str-mir-8382 precursor miRNA

Sequence

UGGAAUUCUAAGAAGCGAAACAAGAUAAUaauaguUUUGGCACUUAAGAAUUCCACU
((((((((((((...((((((............))))))...))).)))))))))..

Structure

--         -   AAG      AAGAU 
  UGGAAUUCU AAG   CGAAAC     A
  ||||||||| |||   ||||||      
  ACCUUAAGA UUC   GUUUug     A
UC         A   ACG      auaaU 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 3569023-3569079 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from str-mir-8382

Mature str-miR-8382-5p

• Accession: MIMAT0033420
• Description: Strongyloides ratti str-miR-8382-5p mature miRNA
• Sequence: 1 - UGGAAUUCUAAGAAGCGAAACAAGAUAAU - 29
• Evidence: experimental ; Illumina [1]

Mature str-miR-8382-3p

• Accession: MIMAT0033421
• Description: Strongyloides ratti str-miR-8382-3p mature miRNA
• Sequence: 36 - UUUGGCACUUAAGAAUUCCACU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260