Stem-loop str-mir-8385

Accession

MI0027149

Description

Strongyloides ratti str-mir-8385 precursor miRNA

Sequence

19502 reads, 384.0 reads per million, 12 experiments

UUUGCAAAGUAUAUCCAAGUCGAUaguguuucauuaucaaucaacaaauuuuaauauuaaaauacucgUGGCUGGAAAGGCUGCAAAUU
((((((..((...((((.((((((((((...))))))).........((((((....))))))......)))))))...))))))))..

Structure

--      AA  AUA    A   -------------------------------       u 
  UUUGCA  GU   UCCA GUC                               GAUagug  
  ||||||  ||   |||| |||                               ||||||| u
  AAACGU  CG   AGGU CGG                               cuauuac  
UU      --  GAA    -   Ugcucauaaaauuauaauuuuaaacaacuaa       u 

Annotation confidence High

Genome context

Unknown

Mature str-miR-8385-5p

• Accession: MIMAT0033430
• Description: Strongyloides ratti str-miR-8385-5p mature miRNA
• Sequence: 1 - UUUGCAAAGUAUAUCCAAGUCGAU - 24
• Evidence: experimental ; Illumina [1]

Mature str-miR-8385-3p

• Accession: MIMAT0033431
• Description: Strongyloides ratti str-miR-8385-3p mature miRNA
• Sequence: 69 - UGGCUGGAAAGGCUGCAAAUU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260