Stem-loop str-mir-8388

Accession

MI0027155

Description

Strongyloides ratti str-mir-8388 precursor miRNA

Sequence

AAGCAAAAUGGGAUGCAAAUAaauauaauaauaaaaUUUGAGACCUCAUCUUAGCUUAG
((((((.(((((...(((((...............)))))....))))).)).))))..

Structure

--    -  A     -AUG     Aaauau 
  AAGC AA AUGGG    CAAAU      a
  |||| || |||||    |||||      a
  UUCG UU UACUC    GUUUa      u
GA    A  C     CAGA     aaauaa 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr01: 393980-394038 [-]

Clustered miRNAs

20 other miRNAs are < 10 kb from str-mir-8388

Mature str-miR-8388-5p

• Accession: MIMAT0033442
• Description: Strongyloides ratti str-miR-8388-5p mature miRNA
• Sequence: 1 - AAGCAAAAUGGGAUGCAAAUA - 21
• Evidence: experimental ; Illumina [1]

Mature str-miR-8388-3p

• Accession: MIMAT0033443
• Description: Strongyloides ratti str-miR-8388-3p mature miRNA
• Sequence: 37 - UUUGAGACCUCAUCUUAGCUUAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260