Stem-loop str-mir-360

Accession

MI0027164

Description

Strongyloides ratti str-mir-360 precursor miRNA

Sequence

699 reads, 16.0 reads per million, 12 experiments

UUGUGACCGUUGUAACGGCUAUUcaauauuaguauaaaagaAUGUCGGAUACAAUGAGCACAAA
(((((..(((((((.((((.((((...............))))))))..)))))))..))))).

Structure

-     AC       -A    U    aauauu 
 UUGUG  CGUUGUA  CGGC AUUc      a
 |||||  |||||||  |||| ||||      g
 AACAC  GUAACAU  GCUG UAag      u
A     GA       AG    -    aaaaua 

Annotation confidence High

Genome context

Sratti_scf00013_Chr00: 1638202-1638265 [-]

Mature str-miR-360-5p

• Accession: MIMAT0033460
• Description: Strongyloides ratti str-miR-360-5p mature miRNA
• Sequence: 1 - UUGUGACCGUUGUAACGGCUAUU - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-360-3p

• Accession: MIMAT0033461
• Description: Strongyloides ratti str-miR-360-3p mature miRNA
• Sequence: 42 - AUGUCGGAUACAAUGAGCACAAA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260