Stem-loop str-mir-8394

Accession

MI0027165

Description

Strongyloides ratti str-mir-8394 precursor miRNA

Sequence

AAGGUGUGGUCGUCGCCAUUAUAucgacugaagugauaUAUGGCACGUACACCAUCUUC
((((((((..(((.(((((.(((((.((....)))))))))))))))..)).)))))).

Structure

-      -  GU   C     U     g  u 
 AAGGUG UG  CGU GCCAU AUAuc ac g
 |||||| ||  ||| ||||| ||||| ||  
 UUCUAC AC  GCA CGGUA Uauag ug a
C      C  AU   -     -     -  a 

Annotation confidence Low

Genome context

Sratti_scf00013_Chr00: 1719940-1719998 [-]

Mature str-miR-8394-5p

• Accession: MIMAT0033462
• Description: Strongyloides ratti str-miR-8394-5p mature miRNA
• Sequence: 1 - AAGGUGUGGUCGUCGCCAUUAUA - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-8394-3p

• Accession: MIMAT0033463
• Description: Strongyloides ratti str-miR-8394-3p mature miRNA
• Sequence: 39 - UAUGGCACGUACACCAUCUUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260