Stem-loop str-mir-37b

Accession

MI0027167

Description

Strongyloides ratti str-mir-37b precursor miRNA

Sequence

AAGUAAUUGUUUCCAUGUUGAUuuauuguuaaauaacUCACCGGGAAUACAAUUACCAAU
..((((((((((((.((.(((.(((((....))))).))).)))))).))))))))....

Structure

--AA        -    A  U   U     g 
    GUAAUUGU UUCC UG UGA uuauu u
    |||||||| |||| || ||| |||||  
    CAUUAACA AAGG GC ACU aauaa u
UAAC        U    -  C   c     a 

Annotation confidence Low

Genome context

Sratti_scf00001_Chr02: 3567173-3567232 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from str-mir-37b

Mature str-miR-37b-5p

• Accession: MIMAT0033466
• Description: Strongyloides ratti str-miR-37b-5p mature miRNA
• Sequence: 1 - AAGUAAUUGUUUCCAUGUUGAU - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-37b-3p

• Accession: MIMAT0033467
• Description: Strongyloides ratti str-miR-37b-3p mature miRNA
• Sequence: 38 - UCACCGGGAAUACAAUUACCAAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260