Stem-loop str-mir-8379b

Accession

MI0027168

Description

Strongyloides ratti str-mir-8379b precursor miRNA

Sequence

UAGCCGUCUAAGGCAGUAUUAGAaaauuuuuaauauaucUGAUACUGUAAAAGACAGCUAA
((((.((((...(((((((((((..............)))))))))))...)))).)))).

Structure

-    C    AAG           aaauuu 
 UAGC GUCU   GCAGUAUUAGA      u
 |||| ||||   |||||||||||       
 AUCG CAGA   UGUCAUAGUcu      u
A    A    AAA           auauaa 

Annotation confidence Not enough data

Genome context

Sratti_scf00002_Chr02: 6867793-6867853 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8379b

Mature str-miR-8379b-3p

• Accession: MIMAT0033468
• Description: Strongyloides ratti str-miR-8379b-3p mature miRNA
• Sequence: 1 - UAGCCGUCUAAGGCAGUAUUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-8379b-5p

• Accession: MIMAT0033469
• Description: Strongyloides ratti str-miR-8379b-5p mature miRNA
• Sequence: 40 - UGAUACUGUAAAAGACAGCUAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260