Stem-loop str-mir-8399

Accession

MI0027180

Description

Strongyloides ratti str-mir-8399 precursor miRNA

Sequence

UUUCAGUAGGGACUUUAUUAAAacuaaaagaaaguaauuUAAUGAUGUCUUACGGAAAUA
((((.(((((.((.(((((((((((.......)))..)))))))).))))))).))))..

Structure

--    A     G  U        --   aa 
  UUUC GUAGG AC UUAUUAAA  acu  a
  |||| ||||| || ||||||||  |||  a
  AAAG CAUUC UG AGUAAUuu  uga  g
AU    G     -  U        aa   aa 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 1045981-1046040 [+]

Mature str-miR-8399-5p

• Accession: MIMAT0033492
• Description: Strongyloides ratti str-miR-8399-5p mature miRNA
• Sequence: 1 - UUUCAGUAGGGACUUUAUUAAA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8399-3p

• Accession: MIMAT0033493
• Description: Strongyloides ratti str-miR-8399-3p mature miRNA
• Sequence: 40 - UAAUGAUGUCUUACGGAAAUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260