Stem-loop str-mir-8402

Accession

MI0027184

Description

Strongyloides ratti str-mir-8402 precursor miRNA

Sequence

UCAAAAAUUCAGCAAUACAAAAGCauguauaucagacagcUUUUGAUUGCGAAUUUUUGUAA
.(((((((((.(((((.(((((((.(((.......))))))))))))))))))))))))...

Structure

--U         A     A       a   au 
   CAAAAAUUC GCAAU CAAAAGC ugu  a
   ||||||||| ||||| ||||||| |||  u
   GUUUUUAAG CGUUA GUUUUcg aca  c
AAU         -     -       -   ga 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr01: 2672081-2672142 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8402

Mature str-miR-8402-5p

• Accession: MIMAT0033500
• Description: Strongyloides ratti str-miR-8402-5p mature miRNA
• Sequence: 1 - UCAAAAAUUCAGCAAUACAAAAGC - 24
• Evidence: experimental ; Illumina [1]

Mature str-miR-8402-3p

• Accession: MIMAT0033501
• Description: Strongyloides ratti str-miR-8402-3p mature miRNA
• Sequence: 41 - UUUUGAUUGCGAAUUUUUGUAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260