Stem-loop pxy-mir-8486

Accession

MI0027289

Description

Plutella xylostella pxy-mir-8486 precursor miRNA

Sequence

179 reads, 79.0 reads per million, 26 experiments

aaaaacagucucagccagguauaCUGUUGGAGUUAUCAUUAAAagauuuaauuuuguuuuguccuguacaaagaauaagacguuuauUAAUGAUAACUUCAACGGUAuaccucguuuagucuguuccg
...(((((.((.(((.((((((((((((((((((((((((((.((((........(((((((.((......)).))))))))))).)))))))))))))))))))))))))).))).)).)))))...

Structure

aaa     u  c   c                          A    uuaauuuu       c  gu 
   aacag cu agc agguauaCUGUUGGAGUUAUCAUUAA agau        guuuugu cu  a
   ||||| || ||| |||||||||||||||||||||||||| ||||        ||||||| ||   
   uuguc ga uug uccauAUGGCAACUUCAAUAGUAAUu uuug        cagaaua ga  c
gcc     u  u   c                          a    --------       a  aa 

Annotation confidence High

Genome context

scaffold_615: 90836-90963 [+]

Mature pxy-miR-8486-5p

• Accession: MIMAT0058599
• Description: Plutella xylostella pxy-miR-8486-5p mature miRNA
• Sequence: 24 - CUGUUGGAGUUAUCAUUAAA - 43
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8486-3p

• Accession: MIMAT0033693
• Description: Plutella xylostella pxy-miR-8486-3p mature miRNA
• Sequence: 88 - UAAUGAUAACUUCAACGGUA - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787