miRBase entry: pxy-mir-8502

Stem-loop pxy-mir-8502


Accession
MI0027307
Description
Plutella xylostella pxy-mir-8502 precursor miRNA


Sequence

49 reads, 2216 reads per million, 4 experiments
agacaaccuuugcaagguuuagucgcugaaugccgacauucuguaaguaauaguaauuuucCAGGAUGUCGGCAUUCAGCGucgaagcccuuugcaauaccuacgcgguuggaa
...(((((.(((((((((((.(.((((((((((((((((((((.((((.......))))..)))))))))))))))))))).).)))))..)))))).........)))))...

Structure
aga     --------u      --     a u                    -u    aa 
   caacc         uugcaa  gguuu g cgcugaaugccgacauucug  aagu  u
   |||||         ||||||  ||||| | ||||||||||||||||||||  ||||  a
   guugg         aacguu  ccgaa c GCGACUUACGGCUGUAGGAC  uuua  g
aag     cgcauccau      uc     g u                    cu    au 


Annotation confidence Not enough data
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Genome context
scaffold_390: 456777-456890 [+]

Database links

Mature pxy-miR-8502

Accession MIMAT0033714
Description Plutella xylostella pxy-miR-8502 mature miRNA
Sequence 62 - CAGGAUGUCGGCAUUCAGCG - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787