miRBase entry: pxy-mir-8504

Dead hairpin entry

Stem-loop pxy-mir-8504


Accession
MI0027309
Description
Plutella xylostella pxy-mir-8504 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

590 reads, 91.0 reads per million, 31 experiments
auacauguauacagggucuccgugcaaguauggauuuaaUGAAGGGGCUGACGAAGGGACUugucgguuucccaaaguugguggaaaacaguaccugaguuaacucauucauuCCAUCCAUACUUGUACGGGUauccuguauaccugacg
...((.(((((((((((.(((((((((((((((((..((((((.(((.((((..(((.(((.((...(((((((....))).)))).))))).)))..)))).))).))))))..))))))))))))))))).))))))))))).))...

Structure
aua  u           c                 uu      G   C    GA   G   u  cgg    -   a 
   ca guauacagggu uccgugcaaguauggau  aaUGAA GGG UGAC  AGG ACU gu   uuuc cca a
   || ||||||||||| |||||||||||||||||  |||||| ||| ||||  ||| ||| ||   |||| |||  
   gu cauauguccua GGGCAUGUUCAUACCUA  uuacuu cuc auug  ucc uga ca   aagg ggu g
gca  c           U                 CC      a   a    ag   a   -  --a    u   u