Stem-loop pxy-mir-8506

Accession

MI0027314

Description

Plutella xylostella pxy-mir-8506 precursor miRNA

Sequence

2810 reads, 564.0 reads per million, 31 experiments

augccgCCUGUGACUCUCACACCUGGUAcguucguggaugcuaUUAGGUGUGAGGGUCACAGCuaguuugguggagg
...(((((((((((((((((((((((((((((....)))).))))))))))))))))))))........)))))...

Structure

aug     --------                    -    c 
   ccgCC        UGUGACUCUCACACCUGGUA cguu g
   |||||        |||||||||||||||||||| ||||  
   ggugg        ACACUGGGAGUGUGGAUUau guag u
gga     uuugauCG                    c    g 

Annotation confidence Medium

Genome context

scaffold_171: 245347-245423 [+]

Mature pxy-miR-8506-5p

• Accession: MIMAT0058603
• Description: Plutella xylostella pxy-miR-8506-5p mature miRNA
• Sequence: 7 - CCUGUGACUCUCACACCUGGUA - 28
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8506-3p

• Accession: MIMAT0033722
• Description: Plutella xylostella pxy-miR-8506-3p mature miRNA
• Sequence: 44 - UUAGGUGUGAGGGUCACAGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787