Stem-loop pxy-mir-8510a-5

Accession

MI0027323

Description

Plutella xylostella pxy-mir-8510a-5 precursor miRNA

Sequence

96 reads, 4693 reads per million, 4 experiments

caagcggcggucuguucucgucgauACUGUGAUCUCACCCGCAAGUcggucgugcacUCGCAGGUGAGAUGAUAGCAUUgaagggaggagcggcaaccacgcacu
...(((((.(.((.(((((.(((((.((((.((((((((.((.(((((....)).))).)).)))))))).)))).))))).))))).))).)).....)))...

Structure

caa   -----  g u  g     g     A    G        C  A   -  g 
   gcg     gc g cu uucuc ucgau CUGU AUCUCACC GC AGU cg u
   |||     || | || ||||| ||||| |||| |||||||| || ||| ||  
   cgc     cg c ga gaggg agUUA GAUA UAGAGUGG CG Uca gu c
uca   accaa  g -  g     a     C    G        A  C   c  g 

Annotation confidence High

Genome context

scaffold_211: 758017-758121 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from pxy-mir-8510a-5

Mature pxy-miR-8510a-5p

• Accession: MIMAT0033732
• Description: Plutella xylostella pxy-miR-8510a-5p mature miRNA
• Sequence: 26 - ACUGUGAUCUCACCCGCAAGU - 46
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8510a-3p

• Accession: MIMAT0033733
• Description: Plutella xylostella pxy-miR-8510a-3p mature miRNA
• Sequence: 58 - UCGCAGGUGAGAUGAUAGCAUU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787