Stem-loop pxy-mir-8510b

Accession

MI0027325

Description

Plutella xylostella pxy-mir-8510b precursor miRNA

Sequence

95 reads, 2999 reads per million, 4 experiments

caagcgguggucuguucucgucgauACUGUGAUCUCACCCGCAAGUcggucgugcacUCGCAGGUGAGAUGAUAGCAUcgaagggaggagcggcaaccacgcacu
...(((.((((((.(((((.(((((.((((.((((((((.((.(((((....)).))).)).)))))))).)))).))))).))))).)).....)))))))...

Structure

caa   g    -----  g     g     A    G        C  A   -  g 
   gcg uggu     cu uucuc ucgau CUGU AUCUCACC GC AGU cg u
   ||| ||||     || ||||| ||||| |||| |||||||| || ||| ||  
   cgc acca     ga gaggg agcUA GAUA UAGAGUGG CG Uca gu c
uca   -    acggc  g     a     C    G        A  C   c  g 

Annotation confidence High

Genome context

scaffold_858: 943-1047 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pxy-mir-8510b

Mature pxy-miR-8510b-5p

• Accession: MIMAT0033734
• Description: Plutella xylostella pxy-miR-8510b-5p mature miRNA
• Sequence: 26 - ACUGUGAUCUCACCCGCAAGU - 46
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8510b-3p

• Accession: MIMAT0033735
• Description: Plutella xylostella pxy-miR-8510b-3p mature miRNA
• Sequence: 58 - UCGCAGGUGAGAUGAUAGCAU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787