Accession
MI0027331
Description
Plutella xylostella
pxy-mir-8515-1 precursor miRNA
Sequence
83
reads,
1247
reads per million, 4 experiments
ccagcgaguagccaucgcgccccgacccccgccgccgcgccgccaccgcgcgcguuccccuaucucccugucguugcauucauuccauuaccggccgcggcgugcagguucuuaugCGGCCGGUAAUGGAAUGAAUGCaacgacaggaagggagggcaacgcgcgcgguggcggcgcggcggcggcgcgguggcgggcuucgcgcgacucguaucuacagug
...((((((.((...((.(((((.((((((((((((((((((((((((((((((((.((((.(((.(((((((((((((((((((((((((((((((((((......)).....))))))))))))))))))))))))))))))))).))).)))).)))))))))))))))))))))))))))).).))).).))))..)).)).))))))..........
...((((((.((...((.(((((.((((((((((((((((((((((((((((((((.((((.(((.(((((((((((((((((((((((((((((((((((......)).....))))))))))))))))))))))))))))))))).))).)))).)))))))))))))))))))))))))))).).))).).))))..)).)).))))))..........
Structure
-------cca a cau -c - g - - c a c ----- gu
gcgagu gc cg gccc c acc c ccgccgccgcgccgccaccgcgcgcguu cccu ucu ccugucguugcauucauuccauuaccggccgcg gc g
|||||| || || |||| | ||| | |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||| ||
ugcuca cg gc cggg g ugg g ggcggcggcgcggcgguggcgcgcgcaa ggga gga ggacagcaaCGUAAGUAAGGUAAUGGCCGGCgu ug c
gugacaucua g --c uu c g c c c g a auucu ga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold_6: 1578444-1578665 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pxy-mir-8515-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pxy-miR-8515
| Accession | MIMAT0033742 |
| Description | Plutella xylostella pxy-miR-8515 mature miRNA |
| Sequence | 117 - CGGCCGGUAAUGGAAUGAAUGC - 138 |
| Evidence |
experimental
Illumina [1] |
References
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