Dead hairpin entry

Stem-loop pxy-mir-8517a

Accession

MI0027332

Description

Plutella xylostella pxy-mir-8517a precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention pxy-mir-8517a
(1 sentences)

Sequence

460 reads, 751.0 reads per million, 29 experiments

ccauauagucuagcccccuuauucauaaaauaguuaguggagacuuaagcUAUUGAACUGUUCUGUCACUCUUUGacagagaacaauuuguucuuUGACAGAGAGGGACAAAACAGUUgaauagcuaaagcguccauuaacuuuuuuaugaauaaggggguuagucuauacau
...(((((.(((((((((((((((((((((.((((((((((..(((.(((((((.(((((((.((((.(((((((.(((((((((...))))))))).))))))).)))).))))))).))))))).)))..)))))))))).))))))))))))))))))))).)))))...

Structure

cca     u                     u          ga   a       G       C    A       a         a 
   uauag cuagcccccuuauucauaaaa aguuagugga  cuu agcUAUU AACUGUU UGUC CUCUUUG cagagaaca  
   ||||| ||||||||||||||||||||| ||||||||||  ||| ||||||| ||||||| |||| ||||||| ||||||||| u
   auauc gauugggggaauaaguauuuu ucaauuaccu  gaa ucgauaa UUGACAA ACAG GAGAGAC GUuucuugu  
uac     u                     u          gc   a       g       A    G       A         u