miRBase entry: pxy-mir-8521b-10

Stem-loop pxy-mir-8521b-10


Accession
MI0027340
Description
Plutella xylostella pxy-mir-8521b-10 precursor miRNA


Sequence

53 reads, 2447 reads per million, 4 experiments
cgcggcaggcagaauucgggacgagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaa
...(((.(((((((((((((((((((((......).)))))))))))))))))).))..)))...

Structure
cgc   -a  -                  - gg 
   ggc  gg cagaauucgggacgagcc c  a
   |||  || |||||||||||||||||| |   
   CCG  UC GUUUUAAGCCCUGUUCgg g  g
aaa   GC  A                  u gc 


Annotation confidence Not enough data
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Genome context
scaffold_127: 934840-934904 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from pxy-mir-8521b-10
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8521b

Accession MIMAT0033751
Description Plutella xylostella pxy-miR-8521b mature miRNA
Sequence 39 - CUUGUCCCGAAUUUUGACUCGGCC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787