Stem-loop pxy-mir-279a

Accession

MI0027347

Description

Plutella xylostella pxy-mir-279a precursor miRNA

Literature search

3 open access papers mention pxy-mir-279a
(10 sentences)

Sequence

79255 reads, 4403.0 reads per million, 31 experiments

cuauauacaugcagcgAGUGGGUGUAAGUCUAGUGCACAguuuuuaauuuugUGACUAGAUCUACACUCAUUGAuugcauuaugauu
...((((.((((((..((((((((((.(((((((.(((((.........)))))))))))).))))))))))..))))))))))...

Structure

cua    c      cg          A       G     uuu 
   uaua augcag  AGUGGGUGUA GUCUAGU CACAg   u
   |||| ||||||  |||||||||| ||||||| |||||   u
   guau uacguu  UUACUCACAU UAGAUCA GUguu   a
uua    -      AG          C       -     uua 

Annotation confidence High

Genome context

scaffold_1: 609684-609770 [+]

Mature pxy-miR-279a-5p

• Accession: MIMAT0033755
• Description: Plutella xylostella pxy-miR-279a-5p mature miRNA
• Sequence: 17 - AGUGGGUGUAAGUCUAGUGCACA - 39
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-279a-3p

• Accession: MIMAT0058613
• Description: Plutella xylostella pxy-miR-279a-3p mature miRNA
• Sequence: 53 - UGACUAGAUCUACACUCAUUGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787