miRBase entry: pxy-mir-8521b-3

Stem-loop pxy-mir-8521b-3


Accession
MI0027350
Description
Plutella xylostella pxy-mir-8521b-3 precursor miRNA


Sequence

54 reads, 2566 reads per million, 4 experiments
cucuggcgcggcagucagaauucgggacgagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaau
...((((.((..((((((((((((((((((((((......).)))))))))))))))))))))))))))...

Structure
cuc    g  gc                     - gg 
   uggc cg  agucagaauucgggacgagcc c  a
   |||| ||  ||||||||||||||||||||| |   
   aCCG GC  UCAGUUUUAAGCCCUGUUCgg g  g
uaa    -  --                     u gc 


Annotation confidence Not enough data
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Genome context
scaffold_127: 920219-920290 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from pxy-mir-8521b-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8521b

Accession MIMAT0033751
Description Plutella xylostella pxy-miR-8521b mature miRNA
Sequence 45 - CUUGUCCCGAAUUUUGACUCGGCC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787