Stem-loop pxy-mir-8520

Accession

MI0027353

Description

Plutella xylostella pxy-mir-8520 precursor miRNA

Sequence

55 reads, 1728 reads per million, 4 experiments

cuuagccccuucucccacUAUACGACUCUCUGGCGAUGCCacagcgacuacgacuggCUUCGCCAGAGAGUCGCAUAGUgggagaugggguuuaa
...((((((.(((((((((((.((((((((((((((.((((...((....))..)))).)))))))))))))).))))))))))).))))))...

Structure

cuu      u           A              U    cag  a 
   agcccc ucucccacUAU CGACUCUCUGGCGA GCCa   cg c
   |||||| ||||||||||| |||||||||||||| ||||   ||  
   uugggg agagggUGAUA GCUGAGAGACCGCU Cggu   gc u
aau      u           C              U    -ca  a 

Annotation confidence Not enough data

Genome context

scaffold_98: 782739-782833 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pxy-mir-8520

Mature pxy-miR-8520-5p

• Accession: MIMAT0033758
• Description: Plutella xylostella pxy-miR-8520-5p mature miRNA
• Sequence: 19 - UAUACGACUCUCUGGCGAUGCC - 40
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8520-3p

• Accession: MIMAT0033759
• Description: Plutella xylostella pxy-miR-8520-3p mature miRNA
• Sequence: 58 - CUUCGCCAGAGAGUCGCAUAGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787