Stem-loop pxy-mir-8500

Accession

MI0027354

Description

Plutella xylostella pxy-mir-8500 precursor miRNA

Sequence

1 reads, 127 reads per million, 1 experiments

cuuaggcugccaguccaccaaaucggagugagcuagcggagcagugugcgaagcuauaaucgugcaauugaauugcaugagcagaguuuuuAUGCAAUUUCGUUGGUUGAUuucacuuugcacaccgcucugcuagcccacuccgcucugguggacaggcagccuuau
...((((((((.((((((((...(((((((.(((((((((((.((((((((((....(((((..((((.((((((((((((.......)))))))))))).))))..)))))...)))))))))).))))))))))).)))))))...)))))))).))))))))...

Structure

cuu        a        aau       a           a          cuau     ug    u            ca 
   aggcugcc guccacca   cggagug gcuagcggagc gugugcgaag    aaucg  caau gaauugcaugag  g
   |||||||| ||||||||   ||||||| ||||||||||| ||||||||||    |||||  |||| ||||||||||||  a
   uccgacgg cagguggu   gccucac cgaucgucucg cacacguuuc    uUAGU  GUUG UUUAACGUAuuu  g
uau        a        cuc       c           c          -acu     UG    C            uu 

Annotation confidence Not enough data

Genome context

scaffold_622: 176059-176226 [+]

Mature pxy-miR-8500

• Accession: MIMAT0033760
• Description: Plutella xylostella pxy-miR-8500 mature miRNA
• Sequence: 92 - AUGCAAUUUCGUUGGUUGAU - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787